Lemon Poppy Seed Cupcakes Recipe
Get ready to fall in love with tangy citrus and delicate crunch—the Lemon Poppy Seed Cupcakes are truly something special. Imagine a fluffy, lemon-infused crumb speckled with tiny poppy seeds, each bite bursting with bright flavors and that irresistible bakery texture. And just when you think it can’t get any better, a luscious blackberry frosting crowns each cupcake with a hint of berry sweetness and the prettiest purple swirl. These Lemon Poppy Seed Cupcakes always bring a little sunshine to the table, whether you’re baking for a celebration or just treating yourself on a weekday afternoon.

Ingredients You’ll Need
There’s nothing fancy or complicated here—just a lineup of reliable ingredients that each play an important role in making your Lemon Poppy Seed Cupcakes tender, moist, and truly memorable. If you have a well-stocked pantry, you’re halfway there already!
- All-purpose flour: Guarantees a tender base with just the right structure for fluffy cupcakes.
- Baking powder: Helps the cupcakes rise to lofty, bakery-style heights.
- Baking soda: Adds extra lift and helps with browning for a golden finish.
- Salt: Balances the sweetness and brightens up all the flavors.
- Unsalted butter, softened: Brings rich flavor and unbeatable moisture—make sure it’s truly at room temp for that perfect creamy mix.
- White sugar: Sweetens and helps create a soft, light crumb.
- Lemon zest: Packs a punch of citrusy aroma and color; freshly grated is the secret to pronounced lemon flavor.
- Large eggs: Bind everything together and give structure.
- Vanilla extract: Adds warmth and rounds out the citrus.
- Sour cream, room temperature: The secret ingredient for super moist cupcakes with a subtle tang.
- Lemon juice, freshly squeezed: Brightens up every bite with real lemon zing.
- Poppy seeds: Tiny bits of subtle crunch and nutty flavor—don’t skip them!
- Blackberries (fresh or frozen): Provide the gorgeous color and fruity pop for our dreamy frosting.
- Butter (for frosting), softened: Whips up smooth and fluffy, perfect for piping.
- Powdered sugar: Essential for light and airy frosting with just the right sweetness.
- Salt (for frosting): Ensures the berry flavor in the frosting shines, not just the sweetness.
- Cream (if needed): Softens up the frosting to the perfect piping consistency.
How to Make Lemon Poppy Seed Cupcakes
Step 1: Prep the Pans and Preheat
Set the stage for cupcake magic by preheating your oven to 350F. Line two muffin pans with paper liners—this recipe yields about 14 Lemon Poppy Seed Cupcakes, so plan for a second pan or bake in two batches.
Step 2: Mix Dry Ingredients
In a large bowl, sift together the flour, baking powder, baking soda, and salt. Give everything a quick whisk. This step is worth the extra minute—it ensures your cupcakes rise evenly and the crumb stays light!
Step 3: Cream the Butter, Sugar, and Lemon Zest
In a separate big mixing bowl, beat the softened butter, sugar, and lemon zest together until the mixture is pale and fluffy. This is where the real lemon fragrance wakes up, infusing every crumb with fresh flavor.
Step 4: Add Eggs and Vanilla
Crack in those eggs, one at a time, and splash in the vanilla extract. Continue beating until the mixture is smooth. It will look creamy, slightly golden, and smell absolutely heavenly.
Step 5: Combine Wet and Dry Ingredients
With your mixer on low, add half the sour cream followed by half the flour mixture. Mix gently and stop to scrape down the bowl. Add the remaining sour cream and flour mixture, mixing until just combined—don’t over-mix at this stage.
Step 6: Add Lemon Juice and Poppy Seeds
Switch to a spatula and gently fold in the lemon juice and poppy seeds. The batter will be fragrant, speckled, and ready for baking.
Step 7: Fill and Bake
Spoon the batter into your lined tins, filling each about two-thirds full. Bake one tray at a time on the oven’s middle rack for 16 to 20 minutes, or until the tops are set and a toothpick comes out clean. Let the Lemon Poppy Seed Cupcakes cool in the pan for 10 minutes, then transfer them to a wire rack to finish cooling completely.
Step 8: Make the Blackberry Frosting
Add fresh or frozen blackberries to a blender and puree until perfectly smooth. Press the puree through a sieve into a saucepan, using the back of a spoon to remove the seeds. Simmer over low heat for 10 to 20 minutes, stirring occasionally, until it’s thick like jam and reduced to 2–4 tablespoons. Let it cool completely.
Step 9: Whip Up the Frosting
In a large bowl, beat the softened butter until totally soft and creamy. On low, add 2 cups powdered sugar and the salt, then beat in 2 tablespoons of your cooled blackberry puree. Continue adding more powdered sugar, 1/2 cup at a time, testing the consistency. If needed, add a bit more puree or a splash of cream until your frosting is thick, spreadable, and deliciously purple.
Step 10: Decorate
Transfer the frosting to a piping bag (a 1M tip makes those classic swirls), or simply frost with a knife if you prefer. Swirl away and admire the dreamy berry topping on your fresh Lemon Poppy Seed Cupcakes—they’re ready for sharing!
How to Serve Lemon Poppy Seed Cupcakes

Garnishes
For a gorgeous finishing touch, sprinkle a few extra poppy seeds on top or add a twist of lemon zest. If you have fresh blackberries on hand, nestle one on top of each frosted cupcake for an elegant and fruity accent.
Side Dishes
Pair these cupcakes with a simple bowl of ripe, juicy berries or a zippy citrus fruit salad. They also shine alongside a cup of Earl Grey tea, chamomile, or even a sweet sparkling lemonade—the tart, creamy cupcake flavor finds its perfect match with light and fruity sips.
Creative Ways to Present
For a party, arrange the Lemon Poppy Seed Cupcakes on a tiered cake stand and scatter edible flowers or mint leaves between them for a bakery-style display. Mini cupcake versions are delightful for spring brunches or showers; just adjust baking times accordingly. Or, serve them in pastel-colored liners for extra dash of cheerful color on your dessert table.
Make Ahead and Storage
Storing Leftovers
Store leftover Lemon Poppy Seed Cupcakes in an airtight container at room temperature for up to 2 days, or in the refrigerator for up to 4 days. The buttercream and cupcake crumb stay nicely fresh, but let them come to room temp before enjoying for the best texture.
Freezing
Want to stash some sunshine for later? Freeze unfrosted cupcakes in an airtight container or freezer bag for up to 2 months. For the frosting, you can freeze it separately in a tightly sealed bag—just thaw overnight in the fridge and whip again before using.
Reheating
If you prefer cupcakes warm or want to refresh them, allow refrigerated cupcakes to come to room temperature, then microwave each (unfrosted) cupcake for 10–15 seconds. Fresh frosting can be piped or spread on after they’ve gently warmed up.
FAQs
Can I use bottled lemon juice instead of fresh?
Freshly squeezed lemon juice is highly recommended for these Lemon Poppy Seed Cupcakes—bottled juice just can’t match that clean, zesty flavor. If you’re really in a pinch, bottled can work, but the fragrance and brightness may not be as intense.
What if I don’t have sour cream?
You can substitute plain full-fat Greek yogurt for the sour cream in the same amount. It’ll keep the cupcakes moist and offer that tangy undertone that pairs so well with the lemon.
Can I use different berries for the frosting?
Absolutely! Raspberries or blueberries are both fabulous options. The frosting color and taste will change slightly, but you’ll still have a delicious, fruity topping that complements the cupcakes beautifully.
Why do my cupcakes sometimes sink in the middle?
Sinking can happen if the cupcake batter is overmixed or if the oven door is opened too soon. Make sure to mix just until combined, and wait until they’re nearly done before checking for doneness.
Can I make these as a cake instead of cupcakes?
Definitely! Simply pour the batter into a greased 8-inch round or square cake pan and bake at 350F. You’ll need to adjust the baking time to about 25–35 minutes; check for a clean toothpick to know when it’s ready.
Final Thoughts
If you’re looking for a dessert that brightens any day, look no further than these Lemon Poppy Seed Cupcakes. They’re simple, stunning, and full of flavor that makes them hard to resist. Give them a try—you’ll see why they’re always on my favorites list, and soon enough your friends and family will be asking for the recipe, too!
PrintLemon Poppy Seed Cupcakes Recipe
Delicious and tangy Lemon Poppy Seed Cupcakes topped with a luscious Blackberry Frosting – a perfect balance of flavors in every bite!
- Prep Time: 20 minutes
- Cook Time: 20 minutes
- Total Time: 40 minutes
- Yield: 14 cupcakes 1x
- Category: Dessert
- Method: Baking
- Cuisine: American
- Diet: Vegetarian
Ingredients
Lemon Poppy Seed Cupcakes
- 1 1/2 cups all-purpose flour
- 1 teaspoon baking powder
- 1/2 teaspoon baking soda
- 1/4 teaspoon salt
- 1/2 cup unsalted butter, softened to room temperature
- 1 cup white sugar
- 2 tablespoons lemon zest*
- 2 large eggs
- 1 teaspoon vanilla extract, room temperature
- 2/3 cup sour cream, room temperature
- 3 tablespoons lemon juice*, freshly squeezed
- 1 1/2 tablespoons poppy seeds
Blackberry Frosting*
- 1 1/2 cups blackberries, fresh or frozen
- 1 cup unsalted butter, softened to room temperature
- 4 cups powdered sugar
- 1/4 teaspoon salt
- 1 tablespoon cream or cream, if needed
Instructions
- Lemon Poppy Seed Cupcakes – Preheat the oven to 350F degrees and line 2 muffin pans with liners. Sift together flour, baking powder, baking soda, and salt. Beat butter, sugar, and lemon zest until fluffy. Beat in eggs and vanilla. Alternate adding sour cream and flour mixture. Fold in lemon juice and poppy seeds. Bake for 16-20 minutes.
- Blackberry Frosting* – Blend blackberries, strain seeds. Simmer puree until thick. Beat butter, powdered sugar, salt, and blackberry puree. Adjust consistency with cream. Frost cupcakes.
Notes
- You can use fresh or frozen blackberries for the frosting.
- Adjust the frosting consistency with more powdered sugar or cream as needed.
- Store cupcakes in an airtight container in the refrigerator for up to 3 days.
Nutrition
- Serving Size: 1 cupcake
- Calories: 290
- Sugar: 28g
- Sodium: 180mg
- Fat: 14g
- Saturated Fat: 8g
- Unsaturated Fat: 5g
- Trans Fat: 0g
- Carbohydrates: 38g
- Fiber: 1g
- Protein: 2g
- Cholesterol: 55mg
Keywords: Lemon Poppy Seed Cupcakes, Blackberry Frosting, Cupcake Recipe, Dessert, Lemon Cupcakes